Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGB4Q8WW32 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 TEKT4P2-202ENST00000559466 1312 ntBASIC14.47□□□□□ -0.09
HMGB4Q8WW32 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 RN7SKP109-201ENST00000410592 316 ntBASIC14.47□□□□□ -0.09
HMGB4Q8WW32 GUSBP10-201ENST00000417412 665 ntBASIC14.47□□□□□ -0.09
HMGB4Q8WW32 OR8T1P-201ENST00000421347 918 ntBASIC14.47□□□□□ -0.09
HMGB4Q8WW32 AL512306.1-201ENST00000432698 848 ntBASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ERP29P1-201ENST00000442902 706 ntBASIC14.47□□□□□ -0.09
HMGB4Q8WW32 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 AP000911.2-201ENST00000534330 502 ntBASIC14.47□□□□□ -0.09
HMGB4Q8WW32 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGB4Q8WW32 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 BRD7P5-201ENST00000299197 1822 ntBASIC14.46□□□□□ -0.09
HMGB4Q8WW32 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 MIR645-201ENST00000385283 94 ntBASIC14.46□□□□□ -0.09
HMGB4Q8WW32 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 KRT18P66-201ENST00000452970 1269 ntBASIC14.46□□□□□ -0.09
HMGB4Q8WW32 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 RNA5SP417-201ENST00000516459 108 ntBASIC14.46□□□□□ -0.09
HMGB4Q8WW32 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 AC005041.3-201ENST00000606287 649 ntBASIC14.46□□□□□ -0.09
HMGB4Q8WW32 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
HMGB4Q8WW32 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGB4Q8WW32 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms