Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OR7E155P-201ENST00000412208 1014 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 RN7SL832P-201ENST00000607781 1756 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AC015912.3-201ENST00000619432 348 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AC105917.1-201ENST00000506637 2539 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 RNA5SP288-201ENST00000516075 93 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AC127002.1-201ENST00000619123 455 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 PCTP-206ENST00000573500 919 ntTSL 3 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 RBMX2P5-201ENST00000424312 969 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 PHBP18-201ENST00000546648 813 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 AC063977.2-201ENST00000601996 421 ntBASIC9.34□□□□□ -0.91
ALMS1Q8TCU4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 AP001102.1-201ENST00000528959 409 ntBASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
ALMS1Q8TCU4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms