Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 LAP3P2-201ENST00000454686 1454 ntBASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH19Q8TAB3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 LINC02486-201ENST00000604157 3000 ntBASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 MTX1P1-201ENST00000440904 838 ntBASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 GOLGA2P4-201ENST00000441462 777 ntBASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 AC124068.2-201ENST00000569473 1109 ntBASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH19Q8TAB3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AC021016.3-201ENST00000608367 477 ntBASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AL096828.3-201ENST00000615354 462 ntBASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AC130686.1-201ENST00000622936 2466 ntBASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms