Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 ELK2AP-201ENST00000392510 1007 ntBASIC15.53■□□□□ 0.08
BEST2Q8NFU1 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 AC007274.2-201ENST00000421675 662 ntBASIC15.53■□□□□ 0.08
BEST2Q8NFU1 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 MIR6769A-201ENST00000617340 73 ntBASIC15.53■□□□□ 0.08
BEST2Q8NFU1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.53■□□□□ 0.08
BEST2Q8NFU1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 AC015909.3-201ENST00000572855 1794 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 DUX4L50-201ENST00000455245 715 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 AC134698.3-201ENST00000523880 214 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 RTN3P1-201ENST00000536295 711 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 AL022334.2-201ENST00000610000 484 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 LINC01783-202ENST00000614408 828 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 BX284668.2-205ENST00000619677 828 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.52■□□□□ 0.08
BEST2Q8NFU1 FAM45BP-202ENST00000592932 1624 ntBASIC15.52■□□□□ 0.08
BEST2Q8NFU1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 AL365209.1-201ENST00000624418 6473 ntBASIC15.52■□□□□ 0.07
BEST2Q8NFU1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
BEST2Q8NFU1 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BEST2Q8NFU1 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms