Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 RN7SL837P-201ENST00000463010 287 ntBASIC13.52□□□□□ -0.25
REEP3Q6NUK4 RN7SL752P-201ENST00000463779 287 ntBASIC13.52□□□□□ -0.25
REEP3Q6NUK4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 SLC25A47P1-201ENST00000531577 414 ntBASIC13.52□□□□□ -0.25
REEP3Q6NUK4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
REEP3Q6NUK4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AL354989.2-201ENST00000435838 1540 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 FAM197Y7-201ENST00000432892 766 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 BCRP2-202ENST00000447763 634 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 COX5BP1-201ENST00000507622 393 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 BCRP6-201ENST00000510112 632 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 BCRP7-201ENST00000511549 544 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AL358472.3-201ENST00000608147 415 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AL022328.1-201ENST00000610050 478 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 BAP1-211ENST00000615113 489 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 AC006453.4-201ENST00000636949 1252 ntBASIC13.51□□□□□ -0.25
REEP3Q6NUK4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
REEP3Q6NUK4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms