Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ARSEP1-201ENST00000420443 635 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AL161932.2-201ENST00000435436 679 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ALG3P1-201ENST00000508806 1114 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 KRT18P25-201ENST00000508931 1278 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AC027237.1-201ENST00000560942 655 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AC005586.2-201ENST00000563946 837 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AC004790.1-201ENST00000612686 536 ntBASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00242Q5T6M2 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AL731571.1-201ENST00000617058 5428 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC009474.1-201ENST00000455096 1565 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 SPDYE19P-201ENST00000338590 713 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AL391647.1-201ENST00000395664 511 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 PUDPP3-201ENST00000445368 636 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 DNAJB3-202ENST00000449667 1266 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AL359711.2-201ENST00000563105 872 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC104506.1-201ENST00000609247 429 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 RNA5-8SN1-201ENST00000610460 153 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 RNA5-8SN5-202ENST00000612463 153 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 RNA5-8SN4-201ENST00000613359 153 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 RNA5-8SN5-201ENST00000619471 153 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC008761.3-201ENST00000624803 892 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 MVK-217ENST00000639206 367 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms