Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 LAP3P2-201ENST00000454686 1454 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H3F3AP84243 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3AP84243 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 TCAM1P-207ENST00000485295 1537 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
H3F3AP84243 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 AC078875.1-201ENST00000431907 724 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 NKAIN1P1-201ENST00000435754 582 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 AC106794.1-201ENST00000506935 792 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 MARK2P5-201ENST00000507649 634 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 AC005740.2-201ENST00000511085 419 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 AC022217.1-201ENST00000521069 738 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.94□□□□□ -0.34
H3F3AP84243 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 AC009779.1-201ENST00000551138 283 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.94□□□□□ -0.34
H3F3AP84243 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 MIR4538-201ENST00000581377 78 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.94□□□□□ -0.34
H3F3AP84243 AC021016.3-201ENST00000608367 477 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
H3F3AP84243 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.94□□□□□ -0.34
H3F3AP84243 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 AL022313.4-201ENST00000562756 2046 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
H3F3AP84243 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H3F3AP84243 AL359183.1-201ENST00000623796 2132 ntBASIC12.94□□□□□ -0.34
H3F3AP84243 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.94□□□□□ -0.34
H3F3AP84243 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H3F3AP84243 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.93□□□□□ -0.34
H3F3AP84243 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H3F3AP84243 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms