Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM4P67936 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.3■□□□□ 0.2
TPM4P67936 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.3■□□□□ 0.2
TPM4P67936 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TPM4P67936 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.3■□□□□ 0.2
TPM4P67936 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.3■□□□□ 0.2
TPM4P67936 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.3■□□□□ 0.2
TPM4P67936 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 KRT18P25-201ENST00000508931 1278 ntBASIC16.3■□□□□ 0.2
TPM4P67936 DOC2GP-202ENST00000514950 1163 ntBASIC16.3■□□□□ 0.2
TPM4P67936 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 AC023310.3-201ENST00000557027 670 ntBASIC16.3■□□□□ 0.2
TPM4P67936 AC100756.1-201ENST00000562736 682 ntBASIC16.3■□□□□ 0.2
TPM4P67936 AC138749.3-201ENST00000567691 622 ntBASIC16.3■□□□□ 0.2
TPM4P67936 AC116165.1-201ENST00000611806 668 ntBASIC16.3■□□□□ 0.2
TPM4P67936 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC16.3■□□□□ 0.2
TPM4P67936 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 AL023775.1-201ENST00000454907 1746 ntBASIC16.3■□□□□ 0.2
TPM4P67936 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM4P67936 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM4P67936 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.29■□□□□ 0.2
TPM4P67936 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TPM4P67936 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.29■□□□□ 0.2
TPM4P67936 ACTBP8-201ENST00000403258 1108 ntBASIC16.29■□□□□ 0.2
TPM4P67936 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.29■□□□□ 0.2
TPM4P67936 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.29■□□□□ 0.2
TPM4P67936 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.29■□□□□ 0.2
TPM4P67936 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.29■□□□□ 0.2
TPM4P67936 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.29■□□□□ 0.2
TPM4P67936 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 KRT18P8-201ENST00000581937 1246 ntBASIC16.29■□□□□ 0.2
TPM4P67936 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 AC008738.7-201ENST00000609744 511 ntBASIC16.29■□□□□ 0.2
TPM4P67936 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.29■□□□□ 0.2
TPM4P67936 AP001002.3-201ENST00000623482 206 ntBASIC16.29■□□□□ 0.2
TPM4P67936 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TPM4P67936 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TPM4P67936 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 AC022144.1-201ENST00000602255 1580 ntBASIC16.29■□□□□ 0.2
TPM4P67936 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TPM4P67936 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM4P67936 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TPM4P67936 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM4P67936 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms