Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN3P20807 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CAPN3P20807 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 MIR1908-201ENST00000410394 80 ntBASIC14.01□□□□□ -0.17
CAPN3P20807 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN3P20807 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
CAPN3P20807 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN3P20807 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN3P20807 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.01□□□□□ -0.17
CAPN3P20807 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN3P20807 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 AC114271.1-201ENST00000612689 2813 ntBASIC14.01□□□□□ -0.17
CAPN3P20807 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN3P20807 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN3P20807 AC019294.4-201ENST00000561777 2905 ntBASIC14.01□□□□□ -0.17
CAPN3P20807 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
CAPN3P20807 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14□□□□□ -0.17
CAPN3P20807 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 AL365181.3-201ENST00000605886 3222 ntBASIC14□□□□□ -0.17
CAPN3P20807 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CAPN3P20807 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14□□□□□ -0.17
CAPN3P20807 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 TMEM14DP-201ENST00000422205 345 ntBASIC14□□□□□ -0.17
CAPN3P20807 KLF2P4-201ENST00000451959 1225 ntBASIC14□□□□□ -0.17
CAPN3P20807 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14□□□□□ -0.17
CAPN3P20807 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14□□□□□ -0.17
CAPN3P20807 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14□□□□□ -0.17
CAPN3P20807 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 AC244093.1-201ENST00000610837 814 ntBASIC14□□□□□ -0.17
CAPN3P20807 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms