Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H1DP16402 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 LINC02486-201ENST00000604157 3000 ntBASIC12.32□□□□□ -0.44
HIST1H1DP16402 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 AC009093.10-201ENST00000641956 1442 ntBASIC12.32□□□□□ -0.44
HIST1H1DP16402 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 MIR1233-2-201ENST00000408138 82 ntBASIC12.32□□□□□ -0.44
HIST1H1DP16402 MIR1233-1-201ENST00000408722 82 ntBASIC12.32□□□□□ -0.44
HIST1H1DP16402 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 AC019294.4-201ENST00000561777 2905 ntBASIC12.32□□□□□ -0.44
HIST1H1DP16402 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
HIST1H1DP16402 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H1DP16402 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 MARK2P9-201ENST00000430958 1727 ntBASIC12.31□□□□□ -0.44
HIST1H1DP16402 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 AP000593.2-201ENST00000542775 1433 ntBASIC12.31□□□□□ -0.44
HIST1H1DP16402 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 AL928654.5-201ENST00000624831 2501 ntBASIC12.31□□□□□ -0.44
HIST1H1DP16402 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 AL391647.1-201ENST00000395664 511 ntBASIC12.31□□□□□ -0.44
HIST1H1DP16402 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H1DP16402 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H1DP16402 AL391280.1-201ENST00000506969 1062 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms