Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC1P02654 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
APOC1P02654 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC1P02654 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
APOC1P02654 AP000593.2-201ENST00000542775 1433 ntBASIC12.91□□□□□ -0.34
APOC1P02654 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC1P02654 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 MIR661-201ENST00000384842 89 ntBASIC12.91□□□□□ -0.34
APOC1P02654 DGCR5-201ENST00000399539 862 ntBASIC12.91□□□□□ -0.34
APOC1P02654 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 CRB3P1-201ENST00000449338 276 ntBASIC12.91□□□□□ -0.34
APOC1P02654 AC007389.4-201ENST00000454674 793 ntBASIC12.91□□□□□ -0.34
APOC1P02654 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.91□□□□□ -0.34
APOC1P02654 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.91□□□□□ -0.34
APOC1P02654 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.91□□□□□ -0.34
APOC1P02654 AC103988.2-201ENST00000561804 725 ntBASIC12.91□□□□□ -0.34
APOC1P02654 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOC1P02654 MIR5189-201ENST00000577370 114 ntBASIC12.91□□□□□ -0.34
APOC1P02654 AC010319.3-201ENST00000597028 470 ntBASIC12.91□□□□□ -0.34
APOC1P02654 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.91□□□□□ -0.34
APOC1P02654 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC1P02654 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC1P02654 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.91□□□□□ -0.34
APOC1P02654 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.91□□□□□ -0.34
APOC1P02654 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
APOC1P02654 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC1P02654 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.91□□□□□ -0.34
APOC1P02654 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
APOC1P02654 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 AC139712.1-201ENST00000378256 1875 ntBASIC12.91□□□□□ -0.34
APOC1P02654 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOC1P02654 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC1P02654 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC1P02654 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
APOC1P02654 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
APOC1P02654 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
APOC1P02654 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 RN7SL832P-201ENST00000607781 1756 ntBASIC12.9□□□□□ -0.34
APOC1P02654 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
APOC1P02654 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
APOC1P02654 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
APOC1P02654 AC005229.1-201ENST00000392885 409 ntBASIC12.9□□□□□ -0.34
APOC1P02654 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.9□□□□□ -0.34
APOC1P02654 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 PUDPP3-201ENST00000445368 636 ntBASIC12.9□□□□□ -0.34
APOC1P02654 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.9□□□□□ -0.34
APOC1P02654 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.9□□□□□ -0.34
APOC1P02654 WASH4P-201ENST00000564273 1246 ntBASIC12.9□□□□□ -0.34
APOC1P02654 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.9□□□□□ -0.34
APOC1P02654 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
APOC1P02654 AC004466.1-201ENST00000599515 1080 ntBASIC12.9□□□□□ -0.34
APOC1P02654 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.9□□□□□ -0.34
APOC1P02654 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.9□□□□□ -0.34
APOC1P02654 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.9□□□□□ -0.34
APOC1P02654 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
APOC1P02654 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
APOC1P02654 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
APOC1P02654 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms