Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AC073862.5-201ENST00000624129 2027 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 PDIA3P1-201ENST00000471856 1510 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 AC007326.2-201ENST00000624224 7579 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 AC002350.2-201ENST00000623894 1828 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 AL139400.1-201ENST00000366220 510 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 AP000347.1-202ENST00000435868 847 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 MEIS3P1-201ENST00000495167 958 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 SNHG9-202ENST00000564014 471 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 AL844908.2-201ENST00000609461 460 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 BX539320.1-201ENST00000623759 877 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 Z92544.3-201ENST00000624747 417 ntBASIC12.51□□□□□ -0.41
HLA-DQB1P01920 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DQB1P01920 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 LINC02486-201ENST00000604157 3000 ntBASIC12.5□□□□□ -0.41
HLA-DQB1P01920 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AC114501.2-201ENST00000439631 535 ntBASIC12.5□□□□□ -0.41
HLA-DQB1P01920 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 KLF2P3-201ENST00000451977 1087 ntBASIC12.5□□□□□ -0.41
HLA-DQB1P01920 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AC125807.1-201ENST00000483097 614 ntBASIC12.5□□□□□ -0.41
HLA-DQB1P01920 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AC140878.1-201ENST00000565277 250 ntBASIC12.5□□□□□ -0.41
HLA-DQB1P01920 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AC015911.4-201ENST00000588022 1070 ntBASIC12.5□□□□□ -0.41
HLA-DQB1P01920 AC093813.1-201ENST00000605066 256 ntBASIC12.5□□□□□ -0.41
HLA-DQB1P01920 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DQB1P01920 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms