Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TNFRSF6BO95407 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
TNFRSF6BO95407 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.59□□□□□ -0.71
TNFRSF6BO95407 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
TNFRSF6BO95407 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AC009084.2-201ENST00000624046 2810 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AL138799.1-201ENST00000448213 1675 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AC023274.1-201ENST00000418278 595 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 NUS1P3-201ENST00000423502 862 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AC004832.2-201ENST00000426397 482 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 FAM58DP-201ENST00000428076 619 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 SORD2P-201ENST00000558556 1069 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AC040169.1-201ENST00000565382 521 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 DUX4L47-201ENST00000566374 394 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 MIR4453-201ENST00000584019 89 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AC027601.4-201ENST00000611259 610 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AC125807.2-201ENST00000513358 3514 ntBASIC10.58□□□□□ -0.72
TNFRSF6BO95407 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
TNFRSF6BO95407 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms