Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EXTL3O43909 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
EXTL3O43909 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EXTL3O43909 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.66■□□□□ 0.1
EXTL3O43909 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.66■□□□□ 0.1
EXTL3O43909 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EXTL3O43909 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EXTL3O43909 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
EXTL3O43909 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
EXTL3O43909 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.65■□□□□ 0.1
EXTL3O43909 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
EXTL3O43909 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
EXTL3O43909 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.65■□□□□ 0.1
EXTL3O43909 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.65■□□□□ 0.1
EXTL3O43909 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.65■□□□□ 0.1
EXTL3O43909 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.65■□□□□ 0.1
EXTL3O43909 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.65■□□□□ 0.1
EXTL3O43909 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.65■□□□□ 0.1
EXTL3O43909 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.65■□□□□ 0.1
EXTL3O43909 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 RN7SL190P-201ENST00000582519 257 ntBASIC15.65■□□□□ 0.1
EXTL3O43909 MIR3188-201ENST00000583494 85 ntBASIC15.65■□□□□ 0.1
EXTL3O43909 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.65■□□□□ 0.1
EXTL3O43909 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 NDUFV2P1-201ENST00000596415 907 ntBASIC15.65■□□□□ 0.1
EXTL3O43909 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.65■□□□□ 0.1
EXTL3O43909 NAP1L6-202ENST00000641404 1222 ntBASIC15.65■□□□□ 0.1
EXTL3O43909 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
EXTL3O43909 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
EXTL3O43909 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.65■□□□□ 0.1
EXTL3O43909 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EXTL3O43909 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
EXTL3O43909 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
EXTL3O43909 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
EXTL3O43909 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.64■□□□□ 0.09
EXTL3O43909 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
EXTL3O43909 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.64■□□□□ 0.09
EXTL3O43909 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EXTL3O43909 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.64■□□□□ 0.09
EXTL3O43909 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.64■□□□□ 0.09
EXTL3O43909 AL157791.1-201ENST00000553667 1699 ntBASIC15.64■□□□□ 0.09
EXTL3O43909 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.64■□□□□ 0.09
EXTL3O43909 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
EXTL3O43909 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EXTL3O43909 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.64■□□□□ 0.09
EXTL3O43909 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.64■□□□□ 0.09
EXTL3O43909 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.64■□□□□ 0.09
EXTL3O43909 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.64■□□□□ 0.09
EXTL3O43909 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.64■□□□□ 0.09
EXTL3O43909 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.64■□□□□ 0.09
EXTL3O43909 HIST2H2BC-201ENST00000498492 580 ntBASIC15.64■□□□□ 0.09
EXTL3O43909 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.64■□□□□ 0.09
EXTL3O43909 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.64■□□□□ 0.09
EXTL3O43909 AC079328.1-201ENST00000560358 952 ntBASIC15.64■□□□□ 0.09
EXTL3O43909 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.64■□□□□ 0.09
EXTL3O43909 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EXTL3O43909 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
EXTL3O43909 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms