Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN5O00501 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CLDN5O00501 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CLDN5O00501 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLDN5O00501 OR2K2-202ENST00000374428 1038 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 RPS9P1-201ENST00000419943 583 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 RN7SL530P-201ENST00000485097 298 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLDN5O00501 POU5F1P2-201ENST00000521750 823 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.21■□□□□ 0.03
CLDN5O00501 AC140658.4-201ENST00000561990 352 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 AC012044.1-201ENST00000603431 297 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 AL353770.1-201ENST00000614915 403 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 MIR6769A-201ENST00000617340 73 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 AC007718.1-201ENST00000621078 280 ntBASIC15.21■□□□□ 0.03
CLDN5O00501 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN5O00501 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN5O00501 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN5O00501 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN5O00501 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLDN5O00501 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN5O00501 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN5O00501 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN5O00501 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN5O00501 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLDN5O00501 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN5O00501 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN5O00501 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN5O00501 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLDN5O00501 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLDN5O00501 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN5O00501 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 ELK2AP-201ENST00000392510 1007 ntBASIC15.2■□□□□ 0.02
CLDN5O00501 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN5O00501 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN5O00501 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN5O00501 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN5O00501 DUX4L50-201ENST00000455245 715 ntBASIC15.2■□□□□ 0.02
CLDN5O00501 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.2■□□□□ 0.02
CLDN5O00501 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 AC134698.3-201ENST00000523880 214 ntBASIC15.2■□□□□ 0.02
CLDN5O00501 RHOQP1-201ENST00000555758 579 ntBASIC15.2■□□□□ 0.02
CLDN5O00501 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 MIR4754-201ENST00000582477 89 ntBASIC15.2■□□□□ 0.02
CLDN5O00501 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN5O00501 AC079336.7-201ENST00000623428 1078 ntBASIC15.2■□□□□ 0.02
CLDN5O00501 AC068587.10-201ENST00000641210 219 ntBASIC15.2■□□□□ 0.02
CLDN5O00501 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN5O00501 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN5O00501 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN5O00501 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN5O00501 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CLDN5O00501 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN5O00501 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms