Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 AC007250.1-201ENST00000608934 338 ntBASIC12.59□□□□□ -0.39
MBD3L3A6NE82 AC073911.3-201ENST00000624401 631 ntBASIC12.59□□□□□ -0.39
MBD3L3A6NE82 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MBD3L3A6NE82 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
MBD3L3A6NE82 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
MBD3L3A6NE82 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
MBD3L3A6NE82 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.58□□□□□ -0.39
MBD3L3A6NE82 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
MBD3L3A6NE82 AC063926.3-201ENST00000624734 5658 ntBASIC12.58□□□□□ -0.39
MBD3L3A6NE82 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 LYPLA2P1-203ENST00000447689 696 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 RN7SL767P-201ENST00000493013 295 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 IGHV3-37-201ENST00000518544 340 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AP003398.1-201ENST00000531124 318 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AC145285.5-201ENST00000562217 361 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AL022313.4-201ENST00000562756 2046 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AL390755.1-201ENST00000623716 2027 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AL590824.1-201ENST00000403828 1349 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AL513477.1-201ENST00000602865 2407 ntBASIC12.58□□□□□ -0.4
MBD3L3A6NE82 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MBD3L3A6NE82 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC090502.4-201ENST00000551714 1386 ntBASIC12.57□□□□□ -0.4
MBD3L3A6NE82 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 TNRC18P2-201ENST00000417666 2714 ntBASIC12.57□□□□□ -0.4
MBD3L3A6NE82 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 RN7SKP109-201ENST00000410592 316 ntBASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 DPY19L2P5-201ENST00000456300 331 ntBASIC12.57□□□□□ -0.4
MBD3L3A6NE82 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms