Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 AC068867.1-201ENST00000559855 150 ntBASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 AC005586.2-201ENST00000563946 837 ntBASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 AGGF1P1-201ENST00000509500 2073 ntBASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCDC187A0A096LP49 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCDC187A0A096LP49 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
CCDC187A0A096LP49 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCDC187A0A096LP49 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCDC187A0A096LP49 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 AC023157.3-201ENST00000619086 2088 ntBASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 AL133467.4-201ENST00000602953 725 ntBASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 AC002044.2-201ENST00000624910 970 ntBASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 AL451007.2-201ENST00000632004 563 ntBASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 TNRC18P2-201ENST00000417666 2714 ntBASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 AC091951.1-201ENST00000512854 2465 ntBASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC187A0A096LP49 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms