Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 MIR4522-201ENST00000584932 87 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AL161773.1-201ENST00000624845 863 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 SNORA50.1-201ENST00000628590 135 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AL139424.3-202ENST00000641619 917 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 AC008620.2-201ENST00000510294 1569 ntBASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NPC1L1Q9UHC9 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 AC026316.1-201ENST00000398900 414 ntBASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 MRPL22P1-201ENST00000505398 616 ntBASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 MARK2P9-201ENST00000430958 1727 ntBASIC19.12■□□□□ 0.65
NPC1L1Q9UHC9 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 EEF1DP2-201ENST00000433698 843 ntBASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 CD81-209ENST00000492627 886 ntTSL 3 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 PRKXP1-201ENST00000561423 1122 ntBASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1L1Q9UHC9 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 AL627231.1-201ENST00000394467 1125 ntBASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 MAGEA5-201ENST00000446757 942 ntBASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 MIR2392-201ENST00000584881 84 ntBASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 AC128714.1-201ENST00000637035 887 ntBASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms