Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NCDNQ9UBB6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AL929302.1-201ENST00000426556 871 ntBASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC098934.1-203ENST00000442868 1262 ntBASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC006529.1-201ENST00000459978 637 ntBASIC14.32□□□□□ -0.12
NCDNQ9UBB6 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 CHCHD2P2-201ENST00000503744 321 ntBASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC106047.2-201ENST00000511723 743 ntBASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.32□□□□□ -0.12
NCDNQ9UBB6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 AC012508.2-201ENST00000567613 1472 ntBASIC14.31□□□□□ -0.12
NCDNQ9UBB6 AC025183.3-201ENST00000623526 1482 ntBASIC14.31□□□□□ -0.12
NCDNQ9UBB6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 PYY2-201ENST00000315776 282 ntBASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 248.1 ms