Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 Z93015.1-201ENST00000451718 390 ntBASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 RNA5SP412-201ENST00000516234 123 ntBASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 AC009884.2-201ENST00000603110 324 ntBASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
BRMS1Q9HCU9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 AC010327.5-201ENST00000586923 3061 ntBASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 AL354877.1-201ENST00000424412 413 ntBASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 AL161932.2-201ENST00000435436 679 ntBASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 MTX1P1-201ENST00000440904 838 ntBASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 RBM8B-201ENST00000555532 525 ntBASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 AC244394.1-201ENST00000435000 1665 ntBASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
BRMS1Q9HCU9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 AC136759.1-202ENST00000530858 2194 ntBASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRMS1Q9HCU9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRMS1Q9HCU9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms