Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.2■□□□□ 0.18
CBX8Q9HC52 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 AC245100.3-201ENST00000441281 285 ntBASIC16.2■□□□□ 0.18
CBX8Q9HC52 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.2■□□□□ 0.18
CBX8Q9HC52 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 AC092552.1-201ENST00000547243 906 ntBASIC16.2■□□□□ 0.18
CBX8Q9HC52 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CBX8Q9HC52 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX8Q9HC52 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 MEX3B-202ENST00000558133 4333 ntBASIC16.19■□□□□ 0.18
CBX8Q9HC52 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 CR383656.2-201ENST00000548656 2254 ntBASIC16.19■□□□□ 0.18
CBX8Q9HC52 AC009474.1-201ENST00000455096 1565 ntBASIC16.19■□□□□ 0.18
CBX8Q9HC52 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 AC098850.1-201ENST00000419919 790 ntBASIC16.19■□□□□ 0.18
CBX8Q9HC52 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 CLUHP6-201ENST00000580789 941 ntBASIC16.19■□□□□ 0.18
CBX8Q9HC52 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 AC099568.2-201ENST00000609194 695 ntBASIC16.19■□□□□ 0.18
CBX8Q9HC52 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX8Q9HC52 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.19■□□□□ 0.18
CBX8Q9HC52 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX8Q9HC52 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC16.18■□□□□ 0.18
CBX8Q9HC52 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms