Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KLHL4Q9C0H6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KLHL4Q9C0H6 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KLHL4Q9C0H6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KLHL4Q9C0H6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
KLHL4Q9C0H6 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
KLHL4Q9C0H6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KLHL4Q9C0H6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 AL353779.1-201ENST00000434793 351 ntBASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 RPL13P2-201ENST00000440687 659 ntBASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.09□□□□□ -0.15
KLHL4Q9C0H6 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
KLHL4Q9C0H6 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 TOMM22P5-201ENST00000416399 439 ntBASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 SPDYE18-201ENST00000510091 1050 ntBASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 AC004461.2-201ENST00000629517 803 ntBASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 AP000437.1-201ENST00000624057 2085 ntBASIC14.08□□□□□ -0.16
KLHL4Q9C0H6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms