Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL161932.2-201ENST00000435436 679 ntBASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 TMEM198B-204ENST00000484016 896 ntBASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AL365181.3-201ENST00000605886 3222 ntBASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 CICP17-201ENST00000418553 2377 ntBASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.33■□□□□ 0.37
UPF3BQ9BZI7 AC009093.10-201ENST00000641956 1442 ntBASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 TUBB8P4-201ENST00000511806 1324 ntBASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 AL512343.1-201ENST00000605837 169 ntBASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 COX11-210ENST00000639671 696 ntBASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UPF3BQ9BZI7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 AL136309.1-201ENST00000403917 691 ntBASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 KRT223P-202ENST00000449164 1292 ntBASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.32■□□□□ 0.36
UPF3BQ9BZI7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms