Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CNTNAP3Q9BZ76 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 FAM45BP-202ENST00000592932 1624 ntBASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 POLR2LP1-206ENST00000444785 187 ntBASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 DUX4L50-201ENST00000455245 715 ntBASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 AC091304.3-201ENST00000566500 716 ntBASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 AC008825.2-201ENST00000603374 718 ntBASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CNTNAP3Q9BZ76 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 AL512599.1-201ENST00000430724 685 ntBASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 STK24P1-201ENST00000455035 1291 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms