Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
PKP4Q99569 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.12□□□□□ -0.15
PKP4Q99569 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.12□□□□□ -0.15
PKP4Q99569 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 BRWD1P1-201ENST00000401091 371 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 MIR1908-201ENST00000410394 80 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 POM121L10P-201ENST00000436994 1285 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 ST13P19-201ENST00000442505 1124 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 SCARNA21-201ENST00000517026 139 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 FAM8A2P-201ENST00000528813 1142 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 AC005324.6-201ENST00000587972 613 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 AC008805.1-201ENST00000590892 364 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.12□□□□□ -0.15
PKP4Q99569 BNIP3P13-201ENST00000599968 566 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 AC007663.3-201ENST00000609632 465 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PKP4Q99569 AC022748.3-201ENST00000621828 275 ntBASIC14.12□□□□□ -0.15
PKP4Q99569 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.12□□□□□ -0.15
PKP4Q99569 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.12□□□□□ -0.15
PKP4Q99569 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.12□□□□□ -0.15
PKP4Q99569 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.12□□□□□ -0.15
PKP4Q99569 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.12□□□□□ -0.15
PKP4Q99569 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.12□□□□□ -0.15
PKP4Q99569 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PKP4Q99569 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.11□□□□□ -0.15
PKP4Q99569 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.11□□□□□ -0.15
PKP4Q99569 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.11□□□□□ -0.15
PKP4Q99569 AL928921.2-201ENST00000641325 2442 ntBASIC14.11□□□□□ -0.15
PKP4Q99569 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PKP4Q99569 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.11□□□□□ -0.15
PKP4Q99569 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.11□□□□□ -0.15
PKP4Q99569 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.11□□□□□ -0.15
PKP4Q99569 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.11□□□□□ -0.15
PKP4Q99569 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.11□□□□□ -0.15
PKP4Q99569 AC004899.1-201ENST00000424687 1714 ntBASIC14.11□□□□□ -0.15
PKP4Q99569 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.11□□□□□ -0.15
PKP4Q99569 VDAC1P1-201ENST00000439229 848 ntBASIC14.11□□□□□ -0.15
PKP4Q99569 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.11□□□□□ -0.15
PKP4Q99569 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.11□□□□□ -0.15
PKP4Q99569 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.11□□□□□ -0.15
PKP4Q99569 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.11□□□□□ -0.15
PKP4Q99569 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.11□□□□□ -0.15
PKP4Q99569 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.11□□□□□ -0.15
PKP4Q99569 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.11□□□□□ -0.15
PKP4Q99569 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.11□□□□□ -0.15
PKP4Q99569 AC133540.1-201ENST00000620845 1019 ntBASIC14.11□□□□□ -0.15
PKP4Q99569 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PKP4Q99569 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PKP4Q99569 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.11□□□□□ -0.15
PKP4Q99569 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.11□□□□□ -0.15
PKP4Q99569 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PKP4Q99569 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PKP4Q99569 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
PKP4Q99569 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
PKP4Q99569 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PKP4Q99569 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
PKP4Q99569 AC104581.4-201ENST00000623126 3052 ntBASIC14.1□□□□□ -0.15
PKP4Q99569 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PKP4Q99569 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PKP4Q99569 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms