Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PTCD2Q8WV60 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AL445523.1-201ENST00000451184 1362 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AL359881.3-201ENST00000602640 1721 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AC016397.2-201ENST00000624848 1985 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 RFESDP1-201ENST00000422350 461 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 FAM8A4P-201ENST00000435433 1213 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AC026407.1-201ENST00000518369 204 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 RN7SL219P-201ENST00000582872 296 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AC006504.5-208ENST00000588784 2401 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 AL035563.1-201ENST00000609087 1539 ntBASIC14.86□□□□□ -0.03
PTCD2Q8WV60 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTCD2Q8WV60 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.85□□□□□ -0.03
PTCD2Q8WV60 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 AC009093.2-202ENST00000620513 2079 ntBASIC14.85□□□□□ -0.03
PTCD2Q8WV60 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 OR51A6P-201ENST00000418680 1004 ntBASIC14.85□□□□□ -0.03
PTCD2Q8WV60 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 MRPL22P1-201ENST00000505398 616 ntBASIC14.85□□□□□ -0.03
PTCD2Q8WV60 COX5BP1-201ENST00000507622 393 ntBASIC14.85□□□□□ -0.03
PTCD2Q8WV60 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms