Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AC134915.1-201ENST00000426461 574 ntBASIC12.63□□□□□ -0.39
CCDC107Q8WV48 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 INGX-202ENST00000489074 768 ntBASIC12.63□□□□□ -0.39
CCDC107Q8WV48 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 RFPL4AP1-201ENST00000530883 850 ntBASIC12.63□□□□□ -0.39
CCDC107Q8WV48 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AC093813.1-201ENST00000605066 256 ntBASIC12.63□□□□□ -0.39
CCDC107Q8WV48 GPALPP1-207ENST00000611650 899 ntBASIC12.63□□□□□ -0.39
CCDC107Q8WV48 BX539320.1-201ENST00000623759 877 ntBASIC12.63□□□□□ -0.39
CCDC107Q8WV48 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AC012617.1-204ENST00000586340 2305 ntBASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 AC111170.3-201ENST00000624282 2464 ntBASIC12.63□□□□□ -0.39
CCDC107Q8WV48 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCDC107Q8WV48 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 MEP1AP4-201ENST00000423244 1087 ntBASIC12.62□□□□□ -0.39
CCDC107Q8WV48 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.62□□□□□ -0.39
CCDC107Q8WV48 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms