Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCER1Q8TC90 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCER1Q8TC90 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCER1Q8TC90 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCER1Q8TC90 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC21.7■■□□□ 1.06
CCER1Q8TC90 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC21.7■■□□□ 1.06
CCER1Q8TC90 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 TPM3P8-201ENST00000330554 643 ntBASIC21.69■■□□□ 1.06
CCER1Q8TC90 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 PIN1P1-201ENST00000412108 996 ntBASIC21.69■■□□□ 1.06
CCER1Q8TC90 ARSEP1-201ENST00000420443 635 ntBASIC21.69■■□□□ 1.06
CCER1Q8TC90 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCER1Q8TC90 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC21.69■■□□□ 1.06
CCER1Q8TC90 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 AP003171.2-201ENST00000528208 925 ntBASIC21.68■■□□□ 1.06
CCER1Q8TC90 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 MIR4683-201ENST00000579659 81 ntBASIC21.68■■□□□ 1.06
CCER1Q8TC90 AC010319.3-201ENST00000597028 470 ntBASIC21.68■■□□□ 1.06
CCER1Q8TC90 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 AC005014.1-201ENST00000432006 2976 ntBASIC21.68■■□□□ 1.06
CCER1Q8TC90 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC21.68■■□□□ 1.06
CCER1Q8TC90 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCER1Q8TC90 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCER1Q8TC90 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 AL161932.2-201ENST00000435436 679 ntBASIC21.67■■□□□ 1.06
CCER1Q8TC90 BCRP1-201ENST00000444246 691 ntBASIC21.67■■□□□ 1.06
CCER1Q8TC90 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 AL590640.2-201ENST00000457038 527 ntBASIC21.67■■□□□ 1.06
CCER1Q8TC90 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.67■■□□□ 1.06
CCER1Q8TC90 AC027237.1-201ENST00000560942 655 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms