Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF439Q8NDP4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF439Q8NDP4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF439Q8NDP4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ZNF439Q8NDP4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF439Q8NDP4 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF439Q8NDP4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF439Q8NDP4 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNF439Q8NDP4 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 ARSEP1-201ENST00000420443 635 ntBASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 AC007551.1-201ENST00000457394 519 ntBASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF439Q8NDP4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC006001.1-201ENST00000325130 474 ntBASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF439Q8NDP4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms