Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC026434.2-201ENST00000506094 1078 ntBASIC13.81□□□□□ -0.2
CHRNB3Q05901 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ZNF890P-202ENST00000530367 1156 ntBASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC135586.1-201ENST00000539323 574 ntBASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC005225.4-201ENST00000557330 545 ntBASIC13.81□□□□□ -0.2
CHRNB3Q05901 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC093813.1-201ENST00000605066 256 ntBASIC13.81□□□□□ -0.2
CHRNB3Q05901 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 TUBB8P4-201ENST00000511806 1324 ntBASIC13.81□□□□□ -0.2
CHRNB3Q05901 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHRNB3Q05901 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRNB3Q05901 AC019294.4-201ENST00000561777 2905 ntBASIC13.8□□□□□ -0.2
CHRNB3Q05901 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 AL844908.2-201ENST00000609461 460 ntBASIC13.8□□□□□ -0.2
CHRNB3Q05901 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 AC012645.4-201ENST00000610691 1061 ntBASIC13.8□□□□□ -0.2
CHRNB3Q05901 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 AL603764.1-201ENST00000636452 321 ntBASIC13.8□□□□□ -0.2
CHRNB3Q05901 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms