Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.2□□□□□ -0.14
CDK3Q00526 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.2□□□□□ -0.14
CDK3Q00526 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDK3Q00526 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 AC012617.1-204ENST00000586340 2305 ntBASIC14.19□□□□□ -0.14
CDK3Q00526 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK3Q00526 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK3Q00526 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.19□□□□□ -0.14
CDK3Q00526 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.19□□□□□ -0.14
CDK3Q00526 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.19□□□□□ -0.14
CDK3Q00526 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 RN7SL67P-201ENST00000492147 296 ntBASIC14.19□□□□□ -0.14
CDK3Q00526 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.19□□□□□ -0.14
CDK3Q00526 IGLV3-15-201ENST00000518356 244 ntBASIC14.19□□□□□ -0.14
CDK3Q00526 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.19□□□□□ -0.14
CDK3Q00526 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.19□□□□□ -0.14
CDK3Q00526 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.19□□□□□ -0.14
CDK3Q00526 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.19□□□□□ -0.14
CDK3Q00526 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CDK3Q00526 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.19□□□□□ -0.14
CDK3Q00526 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK3Q00526 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CDK3Q00526 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDK3Q00526 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CDK3Q00526 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.19□□□□□ -0.14
CDK3Q00526 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK3Q00526 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.19□□□□□ -0.14
CDK3Q00526 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDK3Q00526 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDK3Q00526 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CDK3Q00526 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 KRT18P9-201ENST00000604826 1300 ntBASIC14.18□□□□□ -0.14
CDK3Q00526 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.18□□□□□ -0.14
CDK3Q00526 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.18□□□□□ -0.14
CDK3Q00526 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 RPSAP15-201ENST00000448168 861 ntBASIC14.18□□□□□ -0.14
CDK3Q00526 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CDK3Q00526 KRT8P1-201ENST00000557533 1207 ntBASIC14.18□□□□□ -0.14
CDK3Q00526 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.18□□□□□ -0.14
CDK3Q00526 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK3Q00526 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
CDK3Q00526 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDK3Q00526 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms