Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 PRSS30P-206ENST00000641773 873 ntBASIC10.3□□□□□ -0.76
RPL39P62891 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 AP002761.4-201ENST00000565433 3361 ntBASIC10.3□□□□□ -0.76
RPL39P62891 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
RPL39P62891 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.3□□□□□ -0.76
RPL39P62891 CR383656.2-201ENST00000548656 2254 ntBASIC10.3□□□□□ -0.76
RPL39P62891 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPL39P62891 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
RPL39P62891 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
RPL39P62891 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
RPL39P62891 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC10.29□□□□□ -0.76
RPL39P62891 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 AC125807.2-201ENST00000513358 3514 ntBASIC10.29□□□□□ -0.76
RPL39P62891 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
RPL39P62891 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.29□□□□□ -0.76
RPL39P62891 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
RPL39P62891 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.29□□□□□ -0.76
RPL39P62891 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.29□□□□□ -0.76
RPL39P62891 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
RPL39P62891 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.29□□□□□ -0.76
RPL39P62891 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.29□□□□□ -0.76
RPL39P62891 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 AL928654.5-201ENST00000624831 2501 ntBASIC10.29□□□□□ -0.76
RPL39P62891 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC10.29□□□□□ -0.76
RPL39P62891 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 RNU1-114P-201ENST00000365297 166 ntBASIC10.29□□□□□ -0.76
RPL39P62891 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.29□□□□□ -0.76
RPL39P62891 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC10.29□□□□□ -0.76
RPL39P62891 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.29□□□□□ -0.76
RPL39P62891 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 DNAJB3-201ENST00000446806 729 ntBASIC10.29□□□□□ -0.76
RPL39P62891 AL589987.1-201ENST00000453380 819 ntBASIC10.29□□□□□ -0.76
RPL39P62891 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 AC027369.6-201ENST00000525520 931 ntBASIC10.29□□□□□ -0.76
RPL39P62891 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
RPL39P62891 AC131206.1-201ENST00000538078 1211 ntBASIC10.29□□□□□ -0.76
RPL39P62891 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.29□□□□□ -0.76
RPL39P62891 SORD2P-201ENST00000558556 1069 ntBASIC10.29□□□□□ -0.76
RPL39P62891 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.29□□□□□ -0.76
RPL39P62891 AC036164.1-201ENST00000570544 333 ntBASIC10.29□□□□□ -0.76
RPL39P62891 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.29□□□□□ -0.76
RPL39P62891 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.29□□□□□ -0.76
RPL39P62891 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC10.29□□□□□ -0.76
RPL39P62891 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.29□□□□□ -0.76
RPL39P62891 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
RPL39P62891 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms