Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.25□□□□□ -0.29
CXCR4P61073 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CXCR4P61073 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 AL928654.5-201ENST00000624831 2501 ntBASIC13.24□□□□□ -0.29
CXCR4P61073 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 AL031719.1-201ENST00000623365 2587 ntBASIC13.24□□□□□ -0.29
CXCR4P61073 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.24□□□□□ -0.29
CXCR4P61073 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.24□□□□□ -0.29
CXCR4P61073 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.24□□□□□ -0.29
CXCR4P61073 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.24□□□□□ -0.29
CXCR4P61073 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.24□□□□□ -0.29
CXCR4P61073 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.24□□□□□ -0.29
CXCR4P61073 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.24□□□□□ -0.29
CXCR4P61073 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 AC104506.1-201ENST00000609247 429 ntBASIC13.24□□□□□ -0.29
CXCR4P61073 AL390754.1-201ENST00000619088 582 ntBASIC13.24□□□□□ -0.29
CXCR4P61073 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.24□□□□□ -0.29
CXCR4P61073 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 AL590440.2-201ENST00000641973 1595 ntBASIC13.24□□□□□ -0.29
CXCR4P61073 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CXCR4P61073 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CXCR4P61073 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 CICP1-201ENST00000416803 2410 ntBASIC13.23□□□□□ -0.29
CXCR4P61073 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.23□□□□□ -0.29
CXCR4P61073 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.23□□□□□ -0.29
CXCR4P61073 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CXCR4P61073 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.23□□□□□ -0.29
CXCR4P61073 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms