Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 AL928654.5-201ENST00000624831 2501 ntBASIC12.67□□□□□ -0.38
CLDN12P56749 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CLDN12P56749 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN12P56749 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDN12P56749 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
CLDN12P56749 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN12P56749 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLDN12P56749 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN12P56749 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CLDN12P56749 TSSK5P-201ENST00000423978 907 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN12P56749 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN12P56749 FO681548.1-201ENST00000455617 1132 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 RPL13AP25-201ENST00000484130 612 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 GIMAP3P-201ENST00000495150 836 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 GCOM2-201ENST00000509133 1104 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.66□□□□□ -0.38
CLDN12P56749 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
CLDN12P56749 AC120045.2-201ENST00000567334 178 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN12P56749 AC008738.7-201ENST00000609744 511 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 AC004790.1-201ENST00000612686 536 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN12P56749 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLDN12P56749 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN12P56749 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLDN12P56749 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 INTS4P2-202ENST00000614726 2019 ntBASIC12.66□□□□□ -0.38
CLDN12P56749 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CLDN12P56749 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN12P56749 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 AC135782.3-201ENST00000562782 2105 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.65□□□□□ -0.38
CLDN12P56749 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.65□□□□□ -0.38
CLDN12P56749 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms