Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN6P56747 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN6P56747 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN6P56747 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 MRPL37P1-201ENST00000592451 1337 ntBASIC13.87□□□□□ -0.19
CLDN6P56747 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN6P56747 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 LINC01101-201ENST00000622953 1884 ntBASIC13.87□□□□□ -0.19
CLDN6P56747 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CLDN6P56747 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.86□□□□□ -0.19
CLDN6P56747 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CLDN6P56747 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN6P56747 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 ERP29P1-201ENST00000442902 706 ntBASIC13.86□□□□□ -0.19
CLDN6P56747 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN6P56747 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN6P56747 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN6P56747 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 AC068867.1-201ENST00000559855 150 ntBASIC13.86□□□□□ -0.19
CLDN6P56747 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.86□□□□□ -0.19
CLDN6P56747 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 AL118516.1-201ENST00000564152 670 ntBASIC13.86□□□□□ -0.19
CLDN6P56747 AC124068.2-201ENST00000569473 1109 ntBASIC13.86□□□□□ -0.19
CLDN6P56747 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CLDN6P56747 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 AC002472.4-201ENST00000641915 272 ntBASIC13.86□□□□□ -0.19
CLDN6P56747 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 AL590440.2-201ENST00000641973 1595 ntBASIC13.86□□□□□ -0.19
CLDN6P56747 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.86□□□□□ -0.19
CLDN6P56747 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.86□□□□□ -0.19
CLDN6P56747 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLDN6P56747 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
CLDN6P56747 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.85□□□□□ -0.19
CLDN6P56747 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.85□□□□□ -0.19
CLDN6P56747 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLDN6P56747 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms