Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
EPHB4P54760 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
EPHB4P54760 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHB4P54760 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.33■□□□□ 0.21
EPHB4P54760 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHB4P54760 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EPHB4P54760 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
EPHB4P54760 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB4P54760 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB4P54760 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.33■□□□□ 0.2
EPHB4P54760 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.33■□□□□ 0.2
EPHB4P54760 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 AL132780.4-201ENST00000624870 1135 ntBASIC16.33■□□□□ 0.2
EPHB4P54760 AL008718.2-201ENST00000609206 1313 ntBASIC16.33■□□□□ 0.2
EPHB4P54760 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB4P54760 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
EPHB4P54760 KRT8P21-201ENST00000430398 1491 ntBASIC16.33■□□□□ 0.2
EPHB4P54760 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB4P54760 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHB4P54760 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHB4P54760 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHB4P54760 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.33■□□□□ 0.2
EPHB4P54760 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
EPHB4P54760 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.33■□□□□ 0.2
EPHB4P54760 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EPHB4P54760 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHB4P54760 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
EPHB4P54760 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHB4P54760 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB4P54760 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB4P54760 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EPHB4P54760 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHB4P54760 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHB4P54760 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB4P54760 FAM58BP-201ENST00000439056 645 ntBASIC16.32■□□□□ 0.2
EPHB4P54760 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB4P54760 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.32■□□□□ 0.2
EPHB4P54760 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB4P54760 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.32■□□□□ 0.2
EPHB4P54760 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 AC005962.1-201ENST00000584100 773 ntBASIC16.32■□□□□ 0.2
EPHB4P54760 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
EPHB4P54760 AC005632.3-201ENST00000605544 308 ntBASIC16.32■□□□□ 0.2
EPHB4P54760 INTS4P1-203ENST00000641008 3683 ntBASIC16.32■□□□□ 0.2
EPHB4P54760 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EPHB4P54760 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EPHB4P54760 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.32■□□□□ 0.2
EPHB4P54760 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 ACE3P-201ENST00000423435 1973 ntBASIC16.31■□□□□ 0.2
EPHB4P54760 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 AC011840.2-201ENST00000563063 1520 ntBASIC16.31■□□□□ 0.2
EPHB4P54760 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms