Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
EPHA3P29320 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EPHA3P29320 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
EPHA3P29320 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
EPHA3P29320 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.16□□□□□ -0.14
EPHA3P29320 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
EPHA3P29320 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
EPHA3P29320 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.16□□□□□ -0.14
EPHA3P29320 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
EPHA3P29320 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 AC135782.3-201ENST00000562782 2105 ntBASIC14.15□□□□□ -0.14
EPHA3P29320 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.15□□□□□ -0.14
EPHA3P29320 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
EPHA3P29320 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.15□□□□□ -0.14
EPHA3P29320 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 ACKR1-201ENST00000368121 1240 ntBASIC14.15□□□□□ -0.14
EPHA3P29320 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.15□□□□□ -0.14
EPHA3P29320 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.15□□□□□ -0.14
EPHA3P29320 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 CLUHP6-201ENST00000580789 941 ntBASIC14.15□□□□□ -0.14
EPHA3P29320 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.15□□□□□ -0.14
EPHA3P29320 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 AC133539.2-201ENST00000604757 467 ntBASIC14.15□□□□□ -0.14
EPHA3P29320 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.15□□□□□ -0.14
EPHA3P29320 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.15□□□□□ -0.14
EPHA3P29320 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
EPHA3P29320 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
EPHA3P29320 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.15□□□□□ -0.14
EPHA3P29320 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
EPHA3P29320 AC009093.2-202ENST00000620513 2079 ntBASIC14.14□□□□□ -0.15
EPHA3P29320 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
EPHA3P29320 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.14□□□□□ -0.15
EPHA3P29320 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
EPHA3P29320 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.14□□□□□ -0.15
EPHA3P29320 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.14□□□□□ -0.15
EPHA3P29320 AC245100.3-201ENST00000441281 285 ntBASIC14.14□□□□□ -0.15
EPHA3P29320 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 PUDPP3-201ENST00000445368 636 ntBASIC14.14□□□□□ -0.15
EPHA3P29320 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.14□□□□□ -0.15
EPHA3P29320 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.14□□□□□ -0.15
EPHA3P29320 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.14□□□□□ -0.15
EPHA3P29320 AC123567.1-201ENST00000548294 1261 ntBASIC14.14□□□□□ -0.15
EPHA3P29320 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.14□□□□□ -0.15
EPHA3P29320 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.14□□□□□ -0.15
EPHA3P29320 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.14□□□□□ -0.15
EPHA3P29320 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.14□□□□□ -0.15
EPHA3P29320 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.14□□□□□ -0.15
EPHA3P29320 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EPHA3P29320 AC138466.3-201ENST00000619983 221 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms