Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CHMP24386 TUBB1P2-201ENST00000422712 1306 ntBASIC13.64□□□□□ -0.23
CHMP24386 TUBB1P1-201ENST00000503144 1300 ntBASIC13.64□□□□□ -0.23
CHMP24386 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CHMP24386 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CHMP24386 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CHMP24386 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CHMP24386 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.63□□□□□ -0.23
CHMP24386 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.63□□□□□ -0.23
CHMP24386 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.63□□□□□ -0.23
CHMP24386 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.63□□□□□ -0.23
CHMP24386 ECM1P1-201ENST00000604092 1279 ntBASIC13.63□□□□□ -0.23
CHMP24386 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CHMP24386 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CHMP24386 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHMP24386 MYADML-201ENST00000474610 2147 ntBASIC13.63□□□□□ -0.23
CHMP24386 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHMP24386 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.63□□□□□ -0.23
CHMP24386 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.62□□□□□ -0.23
CHMP24386 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.62□□□□□ -0.23
CHMP24386 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.62□□□□□ -0.23
CHMP24386 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
CHMP24386 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.62□□□□□ -0.23
CHMP24386 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.62□□□□□ -0.23
CHMP24386 BNIP3P42-201ENST00000454982 569 ntBASIC13.62□□□□□ -0.23
CHMP24386 AL590640.2-201ENST00000457038 527 ntBASIC13.62□□□□□ -0.23
CHMP24386 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.62□□□□□ -0.23
CHMP24386 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.62□□□□□ -0.23
CHMP24386 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 MESTP3-201ENST00000503460 968 ntBASIC13.62□□□□□ -0.23
CHMP24386 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.62□□□□□ -0.23
CHMP24386 BNIP3P29-201ENST00000598302 571 ntBASIC13.62□□□□□ -0.23
CHMP24386 AC011447.5-201ENST00000616168 564 ntBASIC13.62□□□□□ -0.23
CHMP24386 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.62□□□□□ -0.23
CHMP24386 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CHMP24386 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHMP24386 AC023794.5-201ENST00000564380 2157 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms