Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
NCLP19338 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.42■□□□□ 0.38
NCLP19338 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.42■□□□□ 0.38
NCLP19338 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NCLP19338 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.41■□□□□ 0.38
NCLP19338 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.41■□□□□ 0.38
NCLP19338 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NCLP19338 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NCLP19338 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
NCLP19338 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NCLP19338 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.41■□□□□ 0.38
NCLP19338 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NCLP19338 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.41■□□□□ 0.38
NCLP19338 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.41■□□□□ 0.38
NCLP19338 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.41■□□□□ 0.38
NCLP19338 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.41■□□□□ 0.38
NCLP19338 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.41■□□□□ 0.38
NCLP19338 CHCHD2P3-201ENST00000603038 451 ntBASIC17.41■□□□□ 0.38
NCLP19338 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.41■□□□□ 0.38
NCLP19338 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.41■□□□□ 0.38
NCLP19338 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 INE2-201ENST00000630399 1874 ntBASIC17.41■□□□□ 0.38
NCLP19338 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 AL365181.3-201ENST00000605886 3222 ntBASIC17.41■□□□□ 0.38
NCLP19338 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NCLP19338 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.41■□□□□ 0.38
NCLP19338 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NCLP19338 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLP19338 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NCLP19338 KRT8P24-201ENST00000560290 1559 ntBASIC17.4■□□□□ 0.38
NCLP19338 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 CU639417.3-201ENST00000624240 1404 ntBASIC17.4■□□□□ 0.38
NCLP19338 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NCLP19338 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NCLP19338 TSN-212ENST00000536142 3328 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NCLP19338 MEP1AP4-201ENST00000423244 1087 ntBASIC17.4■□□□□ 0.38
NCLP19338 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 AL589987.1-201ENST00000453380 819 ntBASIC17.4■□□□□ 0.38
NCLP19338 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.4■□□□□ 0.38
NCLP19338 AC055876.2-201ENST00000531834 546 ntBASIC17.4■□□□□ 0.38
NCLP19338 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
NCLP19338 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NCLP19338 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms