Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VCLP18206 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.68□□□□□ -0.06
VCLP18206 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
VCLP18206 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VCLP18206 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 AC015802.1-201ENST00000588104 1449 ntBASIC14.67□□□□□ -0.06
VCLP18206 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 RN7SKP175-201ENST00000408472 289 ntBASIC14.67□□□□□ -0.06
VCLP18206 AC004945.1-201ENST00000416738 983 ntBASIC14.67□□□□□ -0.06
VCLP18206 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.67□□□□□ -0.06
VCLP18206 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.67□□□□□ -0.06
VCLP18206 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.67□□□□□ -0.06
VCLP18206 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.67□□□□□ -0.06
VCLP18206 AC244157.2-201ENST00000616239 1006 ntBASIC14.67□□□□□ -0.06
VCLP18206 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VCLP18206 AL033527.4-201ENST00000641026 673 ntBASIC14.67□□□□□ -0.06
VCLP18206 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
VCLP18206 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.67□□□□□ -0.06
VCLP18206 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VCLP18206 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VCLP18206 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.67□□□□□ -0.06
VCLP18206 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VCLP18206 AC011840.2-201ENST00000563063 1520 ntBASIC14.66□□□□□ -0.06
VCLP18206 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VCLP18206 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 AC003102.2-201ENST00000589195 1469 ntBASIC14.66□□□□□ -0.06
VCLP18206 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 BTBD6P1-201ENST00000412176 1267 ntBASIC14.66□□□□□ -0.06
VCLP18206 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.66□□□□□ -0.06
VCLP18206 AC007274.1-201ENST00000439805 662 ntBASIC14.66□□□□□ -0.06
VCLP18206 PFN1P12-201ENST00000455938 534 ntBASIC14.66□□□□□ -0.06
VCLP18206 TPT1P11-201ENST00000458482 498 ntBASIC14.66□□□□□ -0.06
VCLP18206 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 RN7SL219P-201ENST00000582872 296 ntBASIC14.66□□□□□ -0.06
VCLP18206 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 AC002472.3-201ENST00000640124 621 ntBASIC14.66□□□□□ -0.06
VCLP18206 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.66□□□□□ -0.06
VCLP18206 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 AC015818.8-201ENST00000587907 1519 ntBASIC14.66□□□□□ -0.06
VCLP18206 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VCLP18206 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.66□□□□□ -0.06
VCLP18206 AL354702.1-201ENST00000442006 1960 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms