Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RB1P06400 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RB1P06400 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RB1P06400 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.16■□□□□ 0.02
RB1P06400 AC019109.1-201ENST00000401725 1874 ntBASIC15.16■□□□□ 0.02
RB1P06400 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RB1P06400 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RB1P06400 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RB1P06400 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.15■□□□□ 0.02
RB1P06400 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.15■□□□□ 0.02
RB1P06400 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 ODCP-201ENST00000459650 1639 ntBASIC15.15■□□□□ 0.02
RB1P06400 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
RB1P06400 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RB1P06400 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
RB1P06400 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
RB1P06400 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
RB1P06400 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RB1P06400 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.15■□□□□ 0.02
RB1P06400 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.15■□□□□ 0.02
RB1P06400 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.15■□□□□ 0.02
RB1P06400 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.15■□□□□ 0.02
RB1P06400 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RB1P06400 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
RB1P06400 DGAT2L7P-201ENST00000602462 744 ntBASIC15.15■□□□□ 0.02
RB1P06400 AC091769.1-201ENST00000619576 568 ntBASIC15.15■□□□□ 0.02
RB1P06400 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RB1P06400 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.15■□□□□ 0.02
RB1P06400 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 CCT8L1P-201ENST00000465400 1674 ntBASIC15.15■□□□□ 0.02
RB1P06400 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RB1P06400 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RB1P06400 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.14■□□□□ 0.02
RB1P06400 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
RB1P06400 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.14■□□□□ 0.01
RB1P06400 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.14■□□□□ 0.01
RB1P06400 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.14■□□□□ 0.01
RB1P06400 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.14■□□□□ 0.01
RB1P06400 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 ASS1P2-201ENST00000439895 1223 ntBASIC15.14■□□□□ 0.01
RB1P06400 KRT18P62-201ENST00000446618 1287 ntBASIC15.14■□□□□ 0.01
RB1P06400 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 CHCHD2P2-201ENST00000503744 321 ntBASIC15.14■□□□□ 0.01
RB1P06400 PRSS3P1-201ENST00000503996 742 ntBASIC15.14■□□□□ 0.01
RB1P06400 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.14■□□□□ 0.01
RB1P06400 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RB1P06400 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.14■□□□□ 0.01
RB1P06400 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.14■□□□□ 0.01
RB1P06400 ABHD17AP9-201ENST00000561925 548 ntBASIC15.14■□□□□ 0.01
RB1P06400 MIR4265-201ENST00000582152 99 ntBASIC15.14■□□□□ 0.01
RB1P06400 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.14■□□□□ 0.01
RB1P06400 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RB1P06400 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RB1P06400 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RB1P06400 AC004554.1-201ENST00000422830 1468 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms