Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.34□□□□□ -0.43
CD3DP04234 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.43
CD3DP04234 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CD3DP04234 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CD3DP04234 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 VDAC1P7-201ENST00000462417 847 ntBASIC12.33□□□□□ -0.44
CD3DP04234 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.33□□□□□ -0.44
CD3DP04234 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.33□□□□□ -0.44
CD3DP04234 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.33□□□□□ -0.44
CD3DP04234 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 AL445250.1-201ENST00000641671 2259 ntBASIC12.33□□□□□ -0.44
CD3DP04234 CICP1-201ENST00000416803 2410 ntBASIC12.33□□□□□ -0.44
CD3DP04234 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.33□□□□□ -0.44
CD3DP04234 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 TNRC18P1-201ENST00000502875 3650 ntBASIC12.33□□□□□ -0.44
CD3DP04234 AC064801.2-201ENST00000625052 1303 ntBASIC12.33□□□□□ -0.44
CD3DP04234 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 AC024075.2-201ENST00000598112 1473 ntBASIC12.33□□□□□ -0.44
CD3DP04234 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD3DP04234 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.33□□□□□ -0.44
CD3DP04234 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 AL355102.3-201ENST00000554299 1678 ntBASIC12.32□□□□□ -0.44
CD3DP04234 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 RNU1-114P-201ENST00000365297 166 ntBASIC12.32□□□□□ -0.44
CD3DP04234 AL139400.1-201ENST00000366220 510 ntBASIC12.32□□□□□ -0.44
CD3DP04234 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CD3DP04234 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms