Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 AL356000.1-201ENST00000441073 1238 ntBASIC20.7■□□□□ 0.9
MLH3Q9UHC1 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 IGKV1OR-2-201ENST00000457995 350 ntBASIC20.7■□□□□ 0.9
MLH3Q9UHC1 DPY19L2P4-201ENST00000479881 442 ntBASIC20.7■□□□□ 0.9
MLH3Q9UHC1 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 RN7SL440P-201ENST00000577855 343 ntBASIC20.7■□□□□ 0.9
MLH3Q9UHC1 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 BX322562.1-201ENST00000617004 561 ntBASIC20.7■□□□□ 0.9
MLH3Q9UHC1 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC20.7■□□□□ 0.9
MLH3Q9UHC1 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MLH3Q9UHC1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 OR4A49P-201ENST00000527050 632 ntBASIC20.69■□□□□ 0.9
MLH3Q9UHC1 PHBP18-201ENST00000546648 813 ntBASIC20.69■□□□□ 0.9
MLH3Q9UHC1 AC010202.1-201ENST00000551181 405 ntBASIC20.69■□□□□ 0.9
MLH3Q9UHC1 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 MIR5091-201ENST00000578707 93 ntBASIC20.69■□□□□ 0.9
MLH3Q9UHC1 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 GUCY2EP-203ENST00000531117 1918 ntBASIC20.69■□□□□ 0.9
MLH3Q9UHC1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 B9D1-206ENST00000461069 923 ntTSL 2 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 AC233724.9-201ENST00000511694 407 ntBASIC20.69■□□□□ 0.9
MLH3Q9UHC1 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC20.69■□□□□ 0.9
MLH3Q9UHC1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
MLH3Q9UHC1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MLH3Q9UHC1 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MLH3Q9UHC1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
MLH3Q9UHC1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
MLH3Q9UHC1 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MLH3Q9UHC1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MLH3Q9UHC1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MLH3Q9UHC1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.67■□□□□ 0.9
MLH3Q9UHC1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms