Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 NUTM2HP-201ENST00000442076 2498 ntBASIC17.9■□□□□ 0.46
UPF2Q9HAU5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC17.9■□□□□ 0.46
UPF2Q9HAU5 AC114271.1-201ENST00000612689 2813 ntBASIC17.9■□□□□ 0.46
UPF2Q9HAU5 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
UPF2Q9HAU5 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC17.89■□□□□ 0.46
UPF2Q9HAU5 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPF2Q9HAU5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPF2Q9HAU5 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.89■□□□□ 0.46
UPF2Q9HAU5 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 RRP7BP-205ENST00000566851 833 ntBASIC17.89■□□□□ 0.45
UPF2Q9HAU5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF2Q9HAU5 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 TSSK5P-201ENST00000423978 907 ntBASIC17.88■□□□□ 0.45
UPF2Q9HAU5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 AC134684.3-201ENST00000641758 218 ntBASIC17.88■□□□□ 0.45
UPF2Q9HAU5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC17.88■□□□□ 0.45
UPF2Q9HAU5 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms