Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 AF254983.2-201ENST00000612331 135 ntBASIC20.88■□□□□ 0.93
SIN3AQ96ST3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 AL157791.1-201ENST00000553667 1699 ntBASIC20.88■□□□□ 0.93
SIN3AQ96ST3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
SIN3AQ96ST3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AC067930.6-201ENST00000623257 4947 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 RPS9P1-201ENST00000419943 583 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 TSPY25P-201ENST00000429463 745 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AL596276.2-201ENST00000447525 331 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 RN7SL277P-201ENST00000481521 288 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 NDUFV2P1-201ENST00000596415 907 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AL591471.1-201ENST00000621855 229 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 BRD7P5-201ENST00000299197 1822 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 AL365181.3-201ENST00000605886 3222 ntBASIC20.87■□□□□ 0.93
SIN3AQ96ST3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SIN3AQ96ST3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 AC011474.4-201ENST00000623523 2076 ntBASIC20.86■□□□□ 0.93
SIN3AQ96ST3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.86■□□□□ 0.93
SIN3AQ96ST3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 MAX-218ENST00000557746 571 ntTSL 4 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 AL022334.2-201ENST00000610000 484 ntBASIC20.86■□□□□ 0.93
SIN3AQ96ST3 AL139099.5-201ENST00000635274 300 ntBASIC20.86■□□□□ 0.93
SIN3AQ96ST3 TCAM1P-207ENST00000485295 1537 ntBASIC20.86■□□□□ 0.93
SIN3AQ96ST3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIN3AQ96ST3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.85■□□□□ 0.93
SIN3AQ96ST3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms