Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 Z82244.2-201ENST00000632196 448 ntBASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC015656.1-201ENST00000624209 3578 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AL121753.2-201ENST00000624581 1461 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AGAP7P-201ENST00000582299 2062 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AGAP14-201ENST00000624701 2060 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 OR7E12P-201ENST00000344740 973 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 TEKT4P2-202ENST00000559466 1312 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC106785.2-201ENST00000564385 1319 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC023908.3-201ENST00000564211 3047 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 AC000077.1-201ENST00000420012 953 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 SNRPCP15-201ENST00000424055 192 ntBASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD1Q96PZ7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 FAM86FP-201ENST00000338711 969 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 ACE3P-201ENST00000423435 1973 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC232323.1-201ENST00000540724 2099 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC073869.1-201ENST00000415574 2762 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 PSAT1P2-201ENST00000426107 972 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC099328.1-201ENST00000498809 1030 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms