Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 HLA-K-203ENST00000430151 1046 ntBASIC12.65□□□□□ -0.38
CCDC107Q8WV48 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AC006538.3-201ENST00000612495 578 ntBASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AL662799.1-202ENST00000614205 422 ntBASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 MAPK10-262ENST00000641051 5738 ntBASIC12.65□□□□□ -0.38
CCDC107Q8WV48 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC107Q8WV48 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCDC107Q8WV48 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.65□□□□□ -0.39
CCDC107Q8WV48 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
CCDC107Q8WV48 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AC004241.5-201ENST00000623870 2448 ntBASIC12.64□□□□□ -0.39
CCDC107Q8WV48 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 RPL13AP25-201ENST00000484130 612 ntBASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AC104596.2-201ENST00000512793 793 ntBASIC12.64□□□□□ -0.39
CCDC107Q8WV48 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AP001582.1-201ENST00000525856 295 ntBASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 MIR8072-201ENST00000614241 80 ntBASIC12.64□□□□□ -0.39
CCDC107Q8WV48 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AC083964.2-201ENST00000623988 2396 ntBASIC12.64□□□□□ -0.39
CCDC107Q8WV48 AC118758.2-201ENST00000614242 2813 ntBASIC12.64□□□□□ -0.39
CCDC107Q8WV48 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.64□□□□□ -0.39
CCDC107Q8WV48 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms