Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.67■□□□□ 0.42
DDR1Q08345 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
DDR1Q08345 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.67■□□□□ 0.42
DDR1Q08345 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.67■□□□□ 0.42
DDR1Q08345 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.67■□□□□ 0.42
DDR1Q08345 AC073869.4-201ENST00000620841 800 ntBASIC17.67■□□□□ 0.42
DDR1Q08345 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDR1Q08345 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDR1Q08345 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDR1Q08345 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDR1Q08345 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDR1Q08345 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDR1Q08345 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.67■□□□□ 0.42
DDR1Q08345 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.67■□□□□ 0.42
DDR1Q08345 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDR1Q08345 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.67■□□□□ 0.42
DDR1Q08345 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 AC104640.1-201ENST00000562617 2109 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 AC018529.2-202ENST00000611482 3087 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 AL354702.1-201ENST00000442006 1960 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 AC025594.1-201ENST00000469533 543 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 RPS18P9-201ENST00000482817 460 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 AC093300.1-201ENST00000510368 1201 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 AC092612.1-201ENST00000514501 998 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC17.66■□□□□ 0.42
DDR1Q08345 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.66■□□□□ 0.42
DDR1Q08345 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDR1Q08345 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.66■□□□□ 0.42
DDR1Q08345 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DDR1Q08345 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDR1Q08345 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DDR1Q08345 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.65■□□□□ 0.42
DDR1Q08345 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.65■□□□□ 0.42
DDR1Q08345 AC022080.1-201ENST00000366255 781 ntBASIC17.65■□□□□ 0.42
DDR1Q08345 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DDR1Q08345 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.65■□□□□ 0.42
DDR1Q08345 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.65■□□□□ 0.42
DDR1Q08345 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.65■□□□□ 0.42
DDR1Q08345 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
DDR1Q08345 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.65■□□□□ 0.42
DDR1Q08345 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.65■□□□□ 0.42
DDR1Q08345 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.65■□□□□ 0.42
DDR1Q08345 AL031673.1-201ENST00000611460 466 ntBASIC17.65■□□□□ 0.42
DDR1Q08345 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.65■□□□□ 0.42
DDR1Q08345 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DDR1Q08345 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.65■□□□□ 0.42
DDR1Q08345 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DDR1Q08345 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DDR1Q08345 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DDR1Q08345 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
DDR1Q08345 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.65■□□□□ 0.42
DDR1Q08345 AL109954.1-202ENST00000564051 2148 ntBASIC17.65■□□□□ 0.42
DDR1Q08345 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.65■□□□□ 0.42
DDR1Q08345 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDR1Q08345 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.42
DDR1Q08345 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
DDR1Q08345 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms