Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CDK5Q00535 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 AC087499.6-201ENST00000411576 835 ntBASIC13.11□□□□□ -0.31
CDK5Q00535 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.11□□□□□ -0.31
CDK5Q00535 AK2P2-201ENST00000439142 405 ntBASIC13.11□□□□□ -0.31
CDK5Q00535 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 ELK1P1-201ENST00000485699 580 ntBASIC13.11□□□□□ -0.31
CDK5Q00535 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.11□□□□□ -0.31
CDK5Q00535 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.11□□□□□ -0.31
CDK5Q00535 AC093214.1-201ENST00000511688 1107 ntBASIC13.11□□□□□ -0.31
CDK5Q00535 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.11□□□□□ -0.31
CDK5Q00535 AC106820.3-201ENST00000561653 397 ntBASIC13.11□□□□□ -0.31
CDK5Q00535 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CDK5Q00535 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 AC009118.2-201ENST00000613275 655 ntBASIC13.11□□□□□ -0.31
CDK5Q00535 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 LINC02486-201ENST00000604157 3000 ntBASIC13.11□□□□□ -0.31
CDK5Q00535 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CDK5Q00535 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.11□□□□□ -0.31
CDK5Q00535 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDK5Q00535 AC009474.1-201ENST00000455096 1565 ntBASIC13.11□□□□□ -0.31
CDK5Q00535 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDK5Q00535 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CDK5Q00535 MSTO2P-201ENST00000314835 1709 ntBASIC13.1□□□□□ -0.31
CDK5Q00535 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.1□□□□□ -0.31
CDK5Q00535 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDK5Q00535 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.1□□□□□ -0.31
CDK5Q00535 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.1□□□□□ -0.31
CDK5Q00535 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.1□□□□□ -0.31
CDK5Q00535 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.1□□□□□ -0.31
CDK5Q00535 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
CDK5Q00535 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.1□□□□□ -0.31
CDK5Q00535 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.1□□□□□ -0.31
CDK5Q00535 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.1□□□□□ -0.31
CDK5Q00535 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.1□□□□□ -0.31
CDK5Q00535 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.1□□□□□ -0.31
CDK5Q00535 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.1□□□□□ -0.31
CDK5Q00535 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.1□□□□□ -0.31
CDK5Q00535 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.1□□□□□ -0.31
CDK5Q00535 AC005498.2-205ENST00000593218 784 ntBASIC13.1□□□□□ -0.31
CDK5Q00535 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.1□□□□□ -0.31
CDK5Q00535 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDK5Q00535 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.1□□□□□ -0.31
CDK5Q00535 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.1□□□□□ -0.31
CDK5Q00535 AC019294.4-201ENST00000561777 2905 ntBASIC13.1□□□□□ -0.31
CDK5Q00535 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms