Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.78□□□□□ -0.52
CX3CL1P78423 BX088702.1-201ENST00000610784 235 ntBASIC11.78□□□□□ -0.52
CX3CL1P78423 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 AC009093.2-202ENST00000620513 2079 ntBASIC11.78□□□□□ -0.52
CX3CL1P78423 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 AC131212.3-201ENST00000624087 4219 ntBASIC11.78□□□□□ -0.52
CX3CL1P78423 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CX3CL1P78423 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CX3CL1P78423 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.78□□□□□ -0.52
CX3CL1P78423 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.78□□□□□ -0.52
CX3CL1P78423 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.78□□□□□ -0.52
CX3CL1P78423 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.78□□□□□ -0.52
CX3CL1P78423 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CX3CL1P78423 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.78□□□□□ -0.52
CX3CL1P78423 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
CX3CL1P78423 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.78□□□□□ -0.52
CX3CL1P78423 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CX3CL1P78423 AC015802.1-201ENST00000588104 1449 ntBASIC11.77□□□□□ -0.52
CX3CL1P78423 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CX3CL1P78423 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.77□□□□□ -0.52
CX3CL1P78423 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CX3CL1P78423 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
CX3CL1P78423 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.77□□□□□ -0.52
CX3CL1P78423 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CX3CL1P78423 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 AC079776.1-201ENST00000401540 1152 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 AC004945.1-201ENST00000416738 983 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.77□□□□□ -0.53
CX3CL1P78423 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 TPT1P11-201ENST00000458482 498 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.77□□□□□ -0.53
CX3CL1P78423 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.77□□□□□ -0.53
CX3CL1P78423 ALG3P1-201ENST00000508806 1114 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.77□□□□□ -0.53
CX3CL1P78423 AC022447.6-201ENST00000515522 438 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 AC104989.1-201ENST00000519711 778 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.77□□□□□ -0.53
CX3CL1P78423 AP003171.2-201ENST00000528208 925 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CX3CL1P78423 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.77□□□□□ -0.53
CX3CL1P78423 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.77□□□□□ -0.53
CX3CL1P78423 RN7SL713P-201ENST00000582127 302 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.77□□□□□ -0.53
CX3CL1P78423 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.77□□□□□ -0.53
CX3CL1P78423 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 AC002472.3-201ENST00000640124 621 ntBASIC11.77□□□□□ -0.53
CX3CL1P78423 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CX3CL1P78423 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CX3CL1P78423 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.77□□□□□ -0.53
CX3CL1P78423 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CX3CL1P78423 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CX3CL1P78423 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CX3CL1P78423 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CX3CL1P78423 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CX3CL1P78423 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms